Create a fastReport object Users have the option of creating a detailed report of their data using FASTQC
1 2 3 4 5 6 7 8 9 | setFastReport(
inDir,
outDir,
validate = FALSE,
fastqcPath = NA_character_,
installFastqc = FALSE,
numThreads = 4,
description = NA_character_
)
|
inDir |
Required input. Path to directory containing FASTQ files. |
outDir |
Required input. Path to write output files. |
validate |
Default is FALSE. When TRUE, all validation functions are executed. |
adapterList |
Required input. List of adapter sequences to remove from files. TODO: Add Example |
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