API for andreaskapou/BPRMeth-devel
Model higher-order methylation profiles

Global functions
.datatable.aware Man page
BPRMeth Man page
BPRMeth-package Man page
basis Man page
betareg Man page
betareg_cluster_wrap Man page
betareg_gradient Man page
betareg_likelihood Man page
betareg_model Man page
betareg_optim Man page
betareg_optim.list Man page
betareg_optim.matrix Man page
betareg_optimise Man page
betareg_optimize Man page
blr Man page
blr_cluster Man page
boxplot_cluster_gex Man page
bpr Man page
bpr_EM_fast Man page
bpr_bayes Man page Man page
bpr_bayes.list Man page
bpr_bayes.matrix Man page
bpr_bayes_predict_wrap Man page
bpr_cluster_wrap Man page
bpr_diff_classify_wrap Man page
bpr_diff_eval_predict_wrap Man page
bpr_diff_predict_wrap Man page
bpr_diff_test_data_wrap Man page
bpr_diff_test_wrap Man page
bpr_gradient Man page
bpr_lik_region Man page
bpr_lik_resp Man page
bpr_likelihood Man page
bpr_model Man page
bpr_optim Man page
bpr_optim.list Man page
bpr_optim.matrix Man page
bpr_optim_fast Man page
bpr_optimise Man page
bpr_optimize Man page
bpr_predict_wrap Man page
create_basis Man page
create_fourier_object Man page
create_methyl_region Man page Man page
create_methyl_region_array Man page
create_methyl_region_saar_eff Man page
create_methyl_region_saar_levels Man page
create_polynomial_object Man page
create_prom_region Man page
create_rbf_object Man page
des_mat Man page
des_matrix, Man page
design_matrix Man page Man page
design_matrix.default Man page
design_matrix.fourier Man page
design_matrix.polynomial Man page
design_matrix.rbf Man page
designmatrix, Man page
eval_function Man page
eval_function.fourier Man page
eval_function.polynomial Man page
eval_function.rbf Man page
eval_functions Man page
eval_probit_function Man page
gex_data Man page
lm_data Man page
met_region Man page
meth_data Man page
methyl_region, Man page
plot_cluster_prof Man page
plot_fitted_profiles Man page
plot_scatter_gex Man page
pool_bs_seq_rep Man page
predict.blr Man page
predict_classification_model Man page
predict_model_gex Man page
preprocess_bs_seq Man page
preprocess_final_HTS_data Man page
print.blr Man page
print.summary.blr Man page
process_bismark_beatson_wrap Man page
process_haib_caltech_wrap Man page
read_bs_bismark_cov Man page
read_bs_encode_haib Man page
read_bs_sc Man page
read_chrom_size Man page
read_encode_cgi Man page
read_rna_beatson Man page
read_rna_encode_caltech Man page
sc_bayes_bpr_fdmm Man page
sc_bayes_bpr_fdmm_old Man page
sc_bpr_cluster_wrap Man page
sum_weighted_betareg_grad Man page
sum_weighted_betareg_lik Man page
sum_weighted_bpr_grad Man page
sum_weighted_bpr_lik Man page
summary.blr Man page
train_classification_model Man page
train_model_gex Man page
andreaskapou/BPRMeth-devel documentation built on May 12, 2019, 3:32 a.m.