plot_scatter_gex: Scatter plot of predicted vs measured gene expression levels
In andreaskapou/BPRMeth-devel: Model higher-order methylation profiles

Description Usage Arguments Value Author(s) See Also Examples

plot_scatter_gex creates a scatter plot of predicted gene expression values on the x-axis versus the measured gene expression values on the y-axis.

1 2	plot_scatter_gex(bpr_predict_obj, main_lab = "Methylation Profile", is_margins = TRUE)

`bpr_predict_obj`	The output of the `bpr_predict_wrap` function.
`main_lab`	The title of the plot
`is_margins`	Use specific margins or not.

The figure to be plotted in the device.

C.A.Kapourani C.A.Kapourani@ed.ac.uk

plot_cluster_prof, plot_fitted_profiles, boxplot_cluster_gex

# Fit methylation profiles using 8 RBFs
obs <- meth_data
y   <- gex_data
basis <- create_rbf_object(M = 8)
res   <- bpr_predict_wrap(x = obs, y = y, basis = basis,
                          is_parallel = FALSE, opt_itnmax = 10)

# Create the scatter plot
plot_scatter_gex(bpr_predict_obj = res)