read_chrom_size: Read genome chromosome sizes file.

Description Usage Arguments Value Author(s) See Also Examples

Description

read_chrom_size reads a file containing genome chromosome sizes using the fread function.

Usage

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Arguments

file

The name of the file to read data values from.

Value

A data.table object.

Author(s)

C.A.Kapourani C.A.Kapourani@ed.ac.uk

See Also

read_rna_encode_caltech, read_bs_encode_haib

Examples

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# Get the location of the hg19 file
hg19_file <- system.file("extdata", "hg19", package = "processHTS")
hg_data <- read_chrom_size(file=hg19_file)

## Not run: 
read.chrom_size(20)

## End(Not run)

andreaskapou/processHTS documentation built on May 12, 2019, 3:33 a.m.