calculate_MS: Calculate module significance

Description Usage Arguments Value Examples

View source: R/calculate_MS.R

Description

Calculate module significance

Usage

1
calculate_MS(met, group_factors)

Arguments

met

fully preprocessed MultiAssayExperiment object with slots "raw", "imputed", "norm" and "norm_imputed"

group_factor

name of column in colData for grouping

Value

adds module significance measures to metadata slot

Examples

1
calculate_MS(met_example, group_factors = c("tumor_normal","random_gender"))

andreasmock/MetaboDiff documentation built on Oct. 31, 2020, 8:18 a.m.