Description Usage Arguments Value Examples
Calculate module significance
1 | calculate_MS(met, group_factors)
|
met |
fully preprocessed MultiAssayExperiment object with slots "raw", "imputed", "norm" and "norm_imputed" |
group_factor |
name of column in colData for grouping |
adds module significance measures to metadata slot
1 | calculate_MS(met_example, group_factors = c("tumor_normal","random_gender"))
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