volcano_plot: Volcano plot of differential analysis

Description Usage Arguments Value Examples

View source: R/volcano_plot.R

Description

Volcano plot of differential analysis

Usage

1
volcano_plot(met, group_factor, label_colors, p_adjust = TRUE, ...)

Arguments

met

fully preprocessed MultiAssayExperiment object with slots "raw", "imputed", "norm" and "norm_imputed"

group_factor

name of column in colData for grouping

label_colors

vector of colors for levels of sample_label

Value

Volcano plot of differential analysis

Examples

1
volcano_plot(met_example, group_factor="tumor_normal", label_colors=c("darkseagreen","dodgerblue"),p_adjust=TRUE)

andreasmock/MetaboDiff documentation built on Oct. 31, 2020, 8:18 a.m.