volcano_plot: Volcano plot of differential analysis
In andreasmock/MetaboDiff: An R package for differential metabolomic analysis
Description
Usage
Arguments
Value
Examples
Description
Volcano plot of differential analysis
Usage
1
volcano_plot(met, group_factor, label_colors, p_adjust = TRUE, ...)
Arguments
met
fully preprocessed MultiAssayExperiment object with slots "raw", "imputed", "norm" and "norm_imputed"
group_factor
name of column in colData for grouping
label_colors
vector of colors for levels of sample_label
Value
Volcano plot of differential analysis
Examples
1
volcano_plot(met_example, group_factor="tumor_normal", label_colors=c("darkseagreen","dodgerblue"),p_adjust=TRUE)
andreasmock/MetaboDiff documentation built on Oct. 31, 2020, 8:18 a.m.
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Description Usage Arguments Value Examples
Description
Volcano plot of differential analysis
Usage
1 | volcano_plot(met, group_factor, label_colors, p_adjust = TRUE, ...)
|
Arguments
met |
fully preprocessed MultiAssayExperiment object with slots "raw", "imputed", "norm" and "norm_imputed" |
group_factor |
name of column in colData for grouping |
label_colors |
vector of colors for levels of sample_label |
Value
Volcano plot of differential analysis
Examples
1 | volcano_plot(met_example, group_factor="tumor_normal", label_colors=c("darkseagreen","dodgerblue"),p_adjust=TRUE)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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