API for annecori/EpiEstim
Estimate Time Varying Reproduction Numbers from Epidemic Curves

Global functions
DiscrSI Man page Source code
EstimateR Man page Source code
Flu1918 Man page
Flu2009 Man page
Measles1861 Man page
MockRotavirus Man page
OverallInfectivity Man page Source code
SARS2003 Man page
Smallpox1972 Man page
WT Man page Source code
check_cdt_samples_convergence Man page Source code
check_config Source code
check_dates Source code
check_si_distr Source code
check_times Source code
coarse2estim Man page Source code
discr_si Man page Source code
estimate_R Man page Source code
estimate_R_func Source code
estimate_R_plots Man page Source code
flu_2009_NYC_school Man page
init_mcmc_params Man page Source code
make_config Man page Source code
make_mcmc_control Man page Source code
mers_2014_15 Man page
modify_defaults Source code
overall_infectivity Man page Source code
plot.estimate_R Man page Source code
process_I Source code
process_I_vector Source code
process_config Source code
process_config_si_from_data Source code
process_si_data Source code
process_si_sample Source code
sample_posterior_R Man page Source code
vcapply Source code
viapply Source code
vlapply Source code
vnapply Source code
wallinga_teunis Man page Source code
annecori/EpiEstim documentation built on May 4, 2021, 9:41 a.m.