percentilenormalize: given a matrix of intensity counts, perform min/max norm.

In arcolombo/imcExperiment: Mass Cytometry S4 Class Structure Pipeline for Images

Description

given a matrix of intensity counts, perform min/max norm.

Usage

percentilenormalize(data = NULL, percentile = NULL)

Arguments

data	matrix of numeric data only
percentile	numeric value 0.99 default.

Value

normalized data, each column on [0,1] scale.

Examples

 data(data)
 dim(data)
 expr<-data[,3:36]
 normExp<-percentilenormalize(data=expr,percentile=0.99)
 normExp<-as.matrix(normExp)

arcolombo/imcExperiment documentation built on Aug. 21, 2021, 2:59 a.m.