create_filter_params: Construct filter parameters from 1µm bead coordinates

View source: R/filter.R

create_filter_paramsR Documentation

Construct filter parameters from 1µm bead coordinates

Description

Construct filter parameters from 1µm bead coordinates

Usage

create_filter_params(
  inst,
  fsc,
  d1,
  d2,
  min_d1,
  min_d2,
  width = 5000,
  slope_file = NULL
)

Arguments

inst

Instrument serial

fsc

25th, 50, 75th quantiles of bead fsc_small

d1

25th, 50, 75th quantiles of bead D1

d2

25th, 50, 75th quantiles of bead D2

min_d1

Y-offset for small particle filter in D1

min_d2

Y-offset for small particle filter in D2

width

Tolerance for D1 == D2 alignment test during filtering

slope_file

CSV file of instrument-calibrated filtering slopes

Value

Data frame of filtering parameters


armbrustlab/popcycle documentation built on March 18, 2024, 1:10 a.m.