csv_convert: Convert data from sqlite3 database into a csv file of curated...

In armbrustlab/popcycle: Popcycle: An R package providing reproducible analytical methods to uniformly process and curate SeaFlow data

Convert data from sqlite3 database into a csv file of curated SeaFlow data for a cruise, along with metadata files.

Description

Convert data from sqlite3 database into a csv file of curated SeaFlow data for a cruise, along with metadata files.

Usage

csv_convert(db, meta, path, cruisename, version = "v1.0")

Arguments

db	SQLite3 database file path.
meta	metadata containing cruise ID (provided by googlesheet "SeaFlow log instrument")
path	Path to save the file.
version	Version of the dataset.

Value

None

Examples

## Not run: 
# load metadata to get offical cruise name
 meta <- googlesheets4::range_read('https://docs.google.com/spreadsheets/d/1Tsi7OWIZWfCQJqLDpId2aG_i-8Cp-p63PYjjvDkOtH4/edit#gid=0')
csv_convert(db,meta, path)

## End(Not run)

armbrustlab/popcycle documentation built on April 1, 2024, 2:41 p.m.