get_opp_table: Return a tibble for the opp table.

In armbrustlab/popcycle: Popcycle: An R package providing reproducible analytical methods to uniformly process and curate SeaFlow data

Return a tibble for the opp table.

Description

Return a tibble for the opp table.

Usage

get_opp_table(
  db,
  sfl_join = TRUE,
  all_sfl_columns = FALSE,
  outlier_join = TRUE,
  particles_in_all_quantiles = TRUE
)

Arguments

db	SQLite3 database file path.
sfl_join	Join to SFL table by file ID, adding a date column and removing OPP entries with no corresponding SFL entry.
all_sfl_columns	If joining to SFL, include all SFL columns.
outlier_join	Left join to outlier table by file ID, adding an outlier flag column. This function will not perform any filtering by outlier flag.
particles_in_all_quantiles	Only keep files that have OPP particles in all quantiles.

Value

Tibble of opp table.

armbrustlab/popcycle documentation built on April 1, 2024, 2:41 p.m.