Files in aya49/flowGraph

Identifying differential cell populations in flow cytometry data accounting for marker frequency

R/00_data.R R/00_flowGraphSubset_constructor.R R/00_flowgraph_class.R R/00_flowgraph_constructor.R R/00_graph.R R/00_helpers.R R/01_flowgraph_accessors.R R/01_flowgraph_modifiers.R R/02_flowgraph_features.R R/03_flowgraph_summary.R R/04_flowgraph_plots.R README.md fcs_processing_guide.R man/cell_type_layers.Rd man/extract_markers.Rd man/fg_add_feature.Rd man/fg_add_summary.Rd man/fg_clean_phen.Rd man/fg_clear_features.Rd man/fg_clear_summary.Rd man/fg_data_fca.Rd man/fg_data_pos2.Rd man/fg_data_pos30.Rd man/fg_extract_phenotypes.Rd man/fg_extract_raw.Rd man/fg_extract_samples.Rd man/fg_feat_cumsum.Rd man/fg_feat_edge_specenr.Rd man/fg_feat_mean_class.Rd man/fg_feat_node_prop.Rd man/fg_feat_node_specenr.Rd man/fg_feat_prop_edge.Rd man/fg_get_feature.Rd man/fg_get_feature_desc.Rd man/fg_get_feature_means.Rd man/fg_get_graph.Rd man/fg_get_markers.Rd man/fg_get_meta.Rd man/fg_get_summary.Rd man/fg_get_summary_desc.Rd man/fg_get_summary_index.Rd man/fg_get_summary_tables.Rd man/fg_gsub_ids.Rd man/fg_gsub_markers.Rd man/fg_load.Rd man/fg_merge.Rd man/fg_merge_samples.Rd man/fg_plot.Rd man/fg_plot_box.Rd man/fg_plot_pVSdiff.Rd man/fg_plot_qq.Rd man/fg_replace_meta.Rd man/fg_rm_feature.Rd man/fg_rm_summary.Rd man/fg_save.Rd man/fg_save_plots.Rd man/fg_set_layout.Rd man/fg_summary.Rd man/flowGraph-class.Rd man/flowGraph.Rd man/flowGraphSubset.Rd man/flowGraphSubset_summary_adjust.Rd man/flowGraphSubset_summary_pars.Rd man/fpurrr_map.Rd man/get_child.Rd man/get_eprop.Rd man/get_paren.Rd man/get_phen_list.Rd man/get_phen_meta.Rd man/ggdf.Rd man/loop_ind_f.Rd man/meandiff.Rd man/ms_create.Rd man/ms_psig.Rd man/plot_gr.Rd man/set_layout_graph.Rd man/summary_table.Rd man/test_c.Rd man/time_output.Rd man/tstr.Rd tests/testthat.R tests/testthat/test-basics.R vignettes/flowGraph.Rmd vignettes/flowGraph_example/README.md