selParaPCAUpQuartile: TODO

In belleau/aicsPaper: Accurate Inference of Genetic Ancestry from Cancer Sequencing

TODO

Description

TODO

Usage

selParaPCAUpQuartile(
  matKNN.All,
  pedCall,
  refCall,
  predCall,
  listCall,
  kList = 3:15,
  pcaList = 2:15
)

Arguments

matKNN.All	TODO see it is rbind matKNN of the computeKNNSuperPoprSynthetic return from group synthetic data
pedCall	TODO see return of prepPedSynthetic1KG
refCall	TODO column name in pedCall with the call
predCall	TODO column name in matKNN with the call
listCall	TODO array of the possible call
kList	TODO array of the k possible values
pcaList	TODO array of the pca dimension possible values

Value

A list TODO with the sample.id and eigenvectors.

Author(s)

Pascal Belleau, Astrid Deschênes and Alexander Krasnitz

Examples

# TODO
listEigenvector <- "TOTO"

belleau/aicsPaper documentation built on Aug. 4, 2022, 1:12 a.m.