allele_dose: Count HLA allele (allele dose) of interest and display their...

In benabidlina/HLAfix: HLA Analysis Pipeline for large-scale Association Studies

Description

Take a file containing at least colunms: subjectId , allele1 , allele 2, prob

Usage

allele_dose(file, selection, outputFile)

Arguments

file	The File containing Hla allele for each individuals and probability to have it
selection	vector of allele of interest
outputFile	The file that will contain the input info and

Value

file with with all input file's data and 2xselection colunms: one for allele count(0 1 2 ) and the other with fractionned dose

benabidlina/HLAfix documentation built on Aug. 20, 2021, 11:53 p.m.