Files in beyondpie/pureRUtils
Commonly used R functions with pure R codes
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
R/SnapATACUtils.R
R/bmat.R
R/color.R
R/dataframe.R
R/figure.R
R/file.R
R/ggplotUtilsFromArchR.R
R/integrateATACWithRNA.R
R/knn.R
R/sequence.R
R/string.R
README.Rmd
README.md
makefile
man/AnnoyBuildIndex.Rd
man/AnnoyNN.Rd
man/AnnoySearch.Rd
man/ArchRPalettes.Rd
man/SnapATACPalette.Rd
man/addMatToSnap.Rd
man/calOvlpScoreOld.Rd
man/checkArgsExistOrStop.Rd
man/checkFileExistOrStop.Rd
man/cleanOutfile.Rd
man/downSampleOnSnap.Rd
man/emptySnapEmbedding.Rd
man/emptySnapGraph.Rd
man/filterSnapBmat.Rd
man/getContinuousColors.Rd
man/getCutoffFromShuffledBmat.Rd
man/getIsolatedGroup.Rd
man/getMatchDataFrame.Rd
man/getMultipleColors.Rd
man/getOverlapMatrix.Rd
man/getOverlapMatrixOld.Rd
man/getPvalueOfNDiff.default.Rd
man/getPvalueOfNDiff.multiGroup.Rd
man/ggPoint.Rd
man/grapes-or-or-grapes.Rd
man/igraphModule2List.Rd
man/integrateWithScRNASeq.Rd
man/landmarkEmbedding.Rd
man/listOfNumeric2str.Rd
man/loadRData.Rd
man/orderSnap.Rd
man/paletteContinuous.Rd
man/paletteDiscrete.Rd
man/plot2D.Rd
man/plotConsensus.Rd
man/plotDotplot.Rd
man/plotFeatureSingle.Rd
man/plotFeatureSingle.SnapATAC.Rd
man/prepareOutdir.Rd
man/prepareOutfile.Rd
man/queryEmbedding.Rd
man/runKNN.Rd
man/runLeiden.Rd
man/sampleBasedOnDepth2.Rd
man/shuffleBmat.Rd
man/snapGmat2Seurat.Rd
man/splitSelect.Rd
man/strToAdjmat.Rd
man/theme_ArchR.Rd
man/uptri2str.Rd
tests/testthat.R
tests/testthat/test-SnapATACUtils.R
tests/testthat/test-color.R
tests/testthat/test-file.R
tests/testthat/test-integrateATACWithRNA.R
tests/testthat/test-sequence.R
tests/testthat/testdata/a.RData
tests/testthat/testdata/all_consensus_stat.txt
tests/testthat/testdata/testMouseBrainOrgSeurat.rds
tests/testthat/testdata/testOvlp.rds
tests/testthat/testdata/testSnap.rds
tests/testthat/testdata/testSnapSeurat.rds
