addExperimentalDesign: Add a new experimental design

In bhklab/Xeva: Analysis of patient-derived xenograft (PDX) data

Add a new experimental design

Description

Add a new experimental design in the expDesign slot.

Usage

addExperimentalDesign(
  object,
  treatment = NULL,
  control = NULL,
  batch.id = NULL,
  replace = FALSE
)

## S4 method for signature 'XevaSet'
addExperimentalDesign(
  object,
  treatment = NULL,
  control = NULL,
  batch.id = NULL,
  replace = FALSE
)

Arguments

object	The Xeva dataset.
treatment	The model.id of treatment.
control	The model.id of control.
batch.id	The batch.id for a new batch.
replace	If TRUE, replace an old batch with new values.

Value

Returns Xeva dataset with new experimental design added.

Examples

data(brca)
brca <- addExperimentalDesign(object=brca, treatment=c("X.6047.LL71"),
        control=c("X.6047.uned"), batch.id="new.batch", replace=FALSE)

bhklab/Xeva documentation built on Nov. 12, 2022, 5:38 a.m.