dosePlot: plot dose data

In bhklab/Xeva: Analysis of patient-derived xenograft (PDX) data

plot dose data

Description

plot data for dose in model.id

Usage

dosePlot(
  object,
  model.id,
  max.time = NULL,
  treatment.only = FALSE,
  vol.normal = FALSE,
  concurrent.time = FALSE,
  point.shape = 21,
  point.size = 3,
  line.size = 4,
  point.color = "#878787",
  line.color = "#bababa",
  fill.col = c("#f5f5f5", "#E55100"),
  modify.x.axis = FALSE
)

Arguments

object	Xeva object.
model.id	one or multiple model.id
max.time	Maximum time point of the plot. Default NULL will plot complete data
treatment.only	Default FALSE. Given full data treatment.only=TRUE will plot data only during treatment
vol.normal	Default FALSE. If TRUE, volume will be normalized
concurrent.time	Default FALSE. If TRUE, cut the batch data such that control and treatment will end at the same time point
point.shape	shape of the point
point.size	size of the point
line.size	size of the line
point.color	color for point
line.color	color for line
fill.col	a vector with color to fill
modify.x.axis	Default FALSE

Value

A ggplot2 plot

Examples

data(brca)
dosePlot(brca, model.id=c("X.6047.LJ16","X.6047.LJ16.trab"), fill.col=c("#f5f5f5", "#993404"))

bhklab/Xeva documentation built on Nov. 30, 2024, 3:17 a.m.