lmm | R Documentation |
Comput the linear mixed model (lmm) statistics for a PDX batch
lmm(data, log.volume)
data |
a data.frame containing a batch data |
log.volume |
FALSE if volume is raw, TRUE if volume is in log |
The input data.frame (data) must contain these columns: 'model.id', 'volume', 'time', 'exp.type'. Lower value from lmm function indicates better response.
Returns a fit object
data(repdx) data <- getExperiment(repdx, batch = "P1")$model lmm(data, log.volume=FALSE) data3 <- getExperiment(repdx, batch = "P3")$model lmm(data3, log.volume=FALSE)
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