plotmRECIST: To plot mRECIST values

In bhklab/Xeva: Analysis of patient-derived xenograft (PDX) data

To plot mRECIST values

Description

plotmRECIST plots the mRECIST matrix obtained from summarizeResponse.

Usage

plotmRECIST(
  mat,
  control.name = NA,
  control.col = "#238b45",
  drug.col = "black",
  colPalette = NULL,
  name = "Drug & Models",
  sort = TRUE,
  row_fontsize = 12,
  col_fontsize = 12,
  legend_title = "Response",
  draw_plot = TRUE
)

Arguments

mat	The mRECIST matrix where rows are drugs and columns are patients.
control.name	Name of the control.
control.col	Color of the control.
drug.col	Color of the drug names.
colPalette	Color palette for mRECIST values.
name	Title of the plot.
sort	If matrix should be sorted before plotting.
row_fontsize	Size of the row name font.
col_fontsize	Size of the column name font.
legend_title	Title for the legend.
draw_plot	Default TRUE will plot the figure. If FALSE, return an object.

Value

mRECIST plot.

Examples

data(brca)
brca.mr <- summarizeResponse(brca, response.measure = "mRECIST", group.by="patient.id")
plotmRECIST(brca.mr, control.name = "untreated")

bhklab/Xeva documentation built on Nov. 12, 2022, 5:38 a.m.