TranslateToEnsembl: TranslateToEnsembl

In bimberlabinternal/OOSAP: OHSU-ONPRC Single-cell Analysis Package

Description

TranslateToEnsembl

Usage

TranslateToEnsembl(
  ensemblIds = NULL,
  geneSymbols = NULL,
  dataset = "mmulatta_gene_ensembl",
  ensemblVersion = NULL,
  ensemblMirror = NULL,
  biomart = "ensembl"
)

Arguments

ensemblIds	A vector of ensembl IDs, passed to the biomaRt::getBM() to query against ensembl_gene_id
geneSymbols	A vector of gene symbols, passed to the biomaRt::getBM() to query against hgnc_symbol
dataset	Passed directly to biomaRt::useEnsembl
ensemblVersion	Passed directly to biomaRt::useEnsembl
ensemblMirror	Passed directly to biomaRt::useEnsembl
biomart	Passed directly to biomaRt::useEnsembl

bimberlabinternal/OOSAP documentation built on Jan. 19, 2021, 2:47 a.m.