transform_features: Transform feature abunadnce table (modified from Maaslin2)
In biobakery/MMUPHin: Meta-analysis Methods with Uniform Pipeline for Heterogeneity in Microbiome Studies
transform_features R Documentation
Transform feature abunadnce table (modified from Maaslin2)
Description
Transform feature abunadnce table (modified from Maaslin2)
Usage
transform_features(features, transform = "NONE", pseudo_count = 0)
Arguments
features
feature-by-sample matrix of abundances (proportions or
counts).
transform
transformation method.
pseudo_count
pseudo count to be added to feature_abd..
Value
transformed abundance table.
biobakery/MMUPHin documentation built on March 30, 2024, 4:50 a.m.
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| transform_features | R Documentation |
Transform feature abunadnce table (modified from Maaslin2)
Description
Transform feature abunadnce table (modified from Maaslin2)
Usage
transform_features(features, transform = "NONE", pseudo_count = 0)
Arguments
features |
feature-by-sample matrix of abundances (proportions or counts). |
transform |
transformation method. |
pseudo_count |
pseudo count to be added to feature_abd.. |
Value
transformed abundance table.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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