Man pages for biobakery/melonnpan
Model-based Genomically Informed High-dimensional Predictor of Microbial Community Metabolite Profiles
| ArcSin | Arc Sine Square Root Transformation for Proportional Data |
| CV.ENET | Fit a regularized linear model |
| generateLambdaPlot | Plot CV Error As A Function of Lambda |
| melonnpan.predict | Model-based Genomically Informed High-dimensional Predictor... |
| melonnpan.summarize | Summarize MelonnPan results |
| melonnpan.test.data | Normalized gene family abundances in the NLIBD dataset... |
| melonnpan.train | Model-based Genomically Informed High-dimensional Predictor... |
| melonnpan.trained.model | Weights from a pre-trained MelonnPan model in the PRISM... |
| melonnpan.training.data | Normalized gene family abundances in the PRISM dataset... |
| melonnpan.visualize | Visualization of Significant Results. |
| readTable | Read data using a wrapper of data.table |
| rntransform | Rank-based inverse normal tranformation |
| SqSin | Back Transformation of Predicted Values from A Statistical... |
