biobakery/melonnpan: Model-based Genomically Informed High-dimensional Predictor of Microbial Community Metabolite Profiles

MelonnPan is a computational method for predicting metabolite compositions from microbiome sequencing data. It uses elastic net regularization to infer which sequencing features are predictive and combines these features to estimate the composite metabolome.

Getting started

Package details

Bioconductor views Metabolomics Metagenomics Software
Maintainer
LicenseMIT
Version0.99.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("biobakery/melonnpan")
biobakery/melonnpan documentation built on Aug. 20, 2019, 4:15 p.m.