GetDescendantNamesFromName: Go from a taxon name to the names of all its descendants
In bomeara/sleq: sleq
Description
Usage
Arguments
Details
Value
Description
Go from a taxon name to the names of all its descendants
Usage
1
GetDescendantNamesFromName(taxon.name, igraph.tree, ncbi.names)
Arguments
taxon.name
A character string with the taxon to match
igraph.tree
The igraph tree (maybe from ConvertNCBINodesToTree())
ncbi.names
The data.frame with names (maybe from GetNCBITaxa)
Details
Note this currently gives a list of ALL named descendant taxa. So if you have a family
it'll give the genera as well as the species
Value
A vector of taxon names
bomeara/sleq documentation built on May 12, 2019, 11:36 p.m.
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Description Usage Arguments Details Value
Description
Go from a taxon name to the names of all its descendants
Usage
1 | GetDescendantNamesFromName(taxon.name, igraph.tree, ncbi.names)
|
Arguments
taxon.name |
A character string with the taxon to match |
igraph.tree |
The igraph tree (maybe from ConvertNCBINodesToTree()) |
ncbi.names |
The data.frame with names (maybe from GetNCBITaxa) |
Details
Note this currently gives a list of ALL named descendant taxa. So if you have a family it'll give the genera as well as the species
Value
A vector of taxon names
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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