plot_aqg: Plot Aquagram

In bpollner/aquap2: Multivariate Data Analysis Tools for R including Aquaphotomics Methods

Plot Aquagram

Description

Plot Aquagram XXX.

Usage

plot_aqg(cube, aps = "def", ...)

Arguments

cube	An object of class 'aquap_cube' as produced by gdmm.
aps	Character length one. The default way to obtain the analysis procedure containing the aquagram plotting parameters. Defaults to "def". Possible values are: "def" The default from the settings.r file is taken. (Argument gen_plot_anprocSource) "cube" Take the analysis procedure from within the cube, i.e. the analysis procedure that was used when creating the cube via gdmm is used. "defFile" Use the analysis procedure with the default filename as specified in the settings.r file in fn_anProcDefFile. Custom filename Provide any valid filename for an analysis procedure to use as input for specifying the plotting options.
...	Optional 'aqg' plotting parameters to override the values in the analysis procedure - for possible arguments see plot_aqg_args.

Details

The width and height of the resulting pdf can be set in the settings.

Value

A pdf or graphic device.

See Also

Other Plot functions: plot,aquap_cube,missing-method, plot,aquap_data,missing-method, plot_classifX_indepPred(), plot_da,aquap_cube-method, plot_nnet,aquap_cube-method, plot_pca,aquap_cube-method, plot_pls,aquap_cube-method, plot_pls_indepPred(), plot_rnf,aquap_cube-method, plot_simca,aquap_cube-method, plot_svm,aquap_cube-method

Other Aquagram documentation: calc_aqg_args, plot_aqg_args, tempCalib_procedures

Examples

 ## Not run: 
 dataset <- gfd()
 cube <- gdmm(dataset)
 plot(cube)
 plot_aqg(cube)
 plot_aqg(cube, aps="fooBar.r") # obtain the analysis procedure with the 
 # plotting parameters from the file 'fooBar.r'.
 
## End(Not run)

bpollner/aquap2 documentation built on March 29, 2024, 7:33 a.m.