plot_sim_args: Plot SIMCA - Arguments

In bpollner/aquap2: Multivariate Data Analysis Tools for R including Aquaphotomics Methods

Plot SIMCA - Arguments

Description

The following parameters can be used in the ... argument in function plot and plot_simca to override the values in the analysis procedure file and so to modify the graphics - see examples.

plot(cube, ...)

plot_simca(cube, ...)

Arguments

do.sim	Logical. If used in a plotting function, if analysis of SIMCA models should be plotted.
pg.where	Character length one. If left at the default 'def', the value from the settings.r file is read in (parameter gen_plot_pgWhereDefault). For plotting to PDFs provide "pdf", for plotting to graphics device provide anything but "pdf".
pg.main	Character length one. The additional text on the title of each single plot.
pg.sub	Character length one. The additional text on the subtitle of each single plot.
pg.fns	Character length one. The additional text in the filename of the pdf.

Details

For a list of all parameters that can be used in the ... argument in getap and in the plot functions please see anproc_file.

See Also

plot_simca

Other Plot arguments: plot,aquap_data,missing-method, plot_NNET_args, plot_SVM_args, plot_aqg_args, plot_discrimAnalysis_args, plot_pca_args, plot_pg_args, plot_pls_args, plot_randomForest_args

Other SIMCA documentation: calc_sim_args, plot_simca,aquap_cube-method

Examples

## Not run: 
dataset <- gfd()
cube <- gdmm(dataset)
plot(cube, pg.sub="bar") # adds 'bar' to the subtitle of each single plot
plot_simca(cube, pg.where="pdf", pg.sub="bar", pg.fns="_bar") # adds '_bar' 
# to the filename of 
# the pdf

## End(Not run)

bpollner/aquap2 documentation built on June 29, 2024, 5:21 p.m.