has_alphabet: Test if all characters in a character vector are members of...
In brendanf/tzara: Cluster long amplicons using dada2 denoising on variable regions
Description
Usage
Arguments
Details
Value
Description
Test if all characters in a character vector are members of an alphabet.
Usage
1
has_alphabet(seq, alphabet)
Arguments
seq
(character) character string(s) to test
alphabet
(character with all elements of width 1)
Details
This function internally uses regular expressions, so
alphabet should not begin with "^" or contain "\". "-",
which commonly represents a gap, is handled correctly.
Value
TRUE if all characters in seq are also in alphabet
brendanf/tzara documentation built on March 11, 2021, 5:40 a.m.
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Description Usage Arguments Details Value
Description
Test if all characters in a character vector are members of an alphabet.
Usage
1 | has_alphabet(seq, alphabet)
|
Arguments
seq |
( |
alphabet |
( |
Details
This function internally uses regular expressions, so
alphabet should not begin with "^" or contain "\". "-",
which commonly represents a gap, is handled correctly.
Value
TRUE if all characters in seq are also in alphabet
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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