API for broadinstitute/CommunityAMARETTO
CommunityAMARETTO: A Computational Tool for the Discovery of Shared and Distinct Regulatory Mechanisms Across Biological Systems
| Global functions | |
|---|---|
| CCLE_Liver_data | Man page |
| ComRunModGenInfo | Man page Source code |
| CommunityHyperLink | Man page Source code |
| CommunityModuleTableCreate | Man page Source code |
| CreateHyperGeoTestAll | Man page Source code |
| CreatePhenotypeTable | Man page Source code |
| DriversSharedTbl | Man page Source code |
| ExtractGenesInfo | Man page Source code |
| Extract_Genes_Modules_All | Man page Source code |
| GmtFromModules | Man page Source code |
| HGTGeneEnrichmentList | Man page Source code |
| HyperGTestGeneEnrichment | Man page Source code |
| InitialCheckInputs | Man page Source code |
| ModuleHyperLink | Man page Source code |
| MsigdbMapping | Man page |
| RunHyperLink | Man page Source code |
| TCGA_LIHC_data | Man page |
| cAMARETTO_ColorOneModule | Man page Source code |
| cAMARETTO_ExportResults | Man page Source code |
| cAMARETTO_HTML_Read | Man page Source code |
| cAMARETTO_HTMLreport | Man page Source code |
| cAMARETTO_IdentifyCom | Man page Source code |
| cAMARETTO_InformationTable | Man page Source code |
| cAMARETTO_ModuleNetwork | Man page Source code |
| cAMARETTO_Read | Man page Source code |
| cAMARETTO_Results | Man page Source code |
| cAMARETTO_heatmap | Man page Source code |
| create_hgt_datatable | Man page Source code |
| drivers_communities_summary | Man page Source code |
| readGMT | Man page Source code |
| scHBV_data | Man page |
| scHCV_data | Man page |
