ExtractGenesInfo: Title ExtractGenesInfo
In broadinstitute/CommunityAMARETTO: CommunityAMARETTO: A Computational Tool for the Discovery of Shared and Distinct Regulatory Mechanisms Across Biological Systems
Description
Usage
Arguments
Value
Examples
View source: R/cAMARETTO_Results.R
Description
Title ExtractGenesInfo
Usage
1
ExtractGenesInfo(AMARETTOresults, run)
Arguments
AMARETTOresults
AMARETTOreults object from an AMARETTO run.
run
the run-name string , for example :"TCGA_LIHC",
associated with the AMARETTOreults run.
Value
returns a dataframe with columns of runname,
module-number, genename, gene-types, and weights of the driver genes.
Examples
1
2
3
try(
ExtractGenesInfo(AMARETTOresults,"TCGA-LIHC")
)
broadinstitute/CommunityAMARETTO documentation built on April 6, 2020, 10:44 p.m.
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Description Usage Arguments Value Examples
View source: R/cAMARETTO_Results.R
Description
Title ExtractGenesInfo
Usage
1 | ExtractGenesInfo(AMARETTOresults, run)
|
Arguments
AMARETTOresults |
AMARETTOreults object from an AMARETTO run. |
run |
the run-name string , for example :"TCGA_LIHC", associated with the AMARETTOreults run. |
Value
returns a dataframe with columns of runname, module-number, genename, gene-types, and weights of the driver genes.
Examples
1 2 3 | try(
ExtractGenesInfo(AMARETTOresults,"TCGA-LIHC")
)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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