Extract_Genes_Modules_All: Title Extract_Genes_Modules_All
In broadinstitute/CommunityAMARETTO: CommunityAMARETTO: A Computational Tool for the Discovery of Shared and Distinct Regulatory Mechanisms Across Biological Systems
Description
Usage
Arguments
Value
Examples
View source: R/cAMARETTO_Results.R
Description
Title Extract_Genes_Modules_All
Usage
1
Extract_Genes_Modules_All(AMARETTOresults_all, gmt_filelist)
Arguments
AMARETTOresults_all
list of
AMARETTOresults objects for different AMARETTO runs
gmt_filelist
addresses to gmt files.
Value
a dataframe for all AMARETTO files and
given gmt file with the following structure : runname, ModuleNr,
genename, gene-types, and weights of the driver genes.
Examples
1
try(Extract_Genes_Modules_All(AMARETTOresults_all,gmt_filelist))
broadinstitute/CommunityAMARETTO documentation built on April 6, 2020, 10:44 p.m.
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Description Usage Arguments Value Examples
View source: R/cAMARETTO_Results.R
Description
Title Extract_Genes_Modules_All
Usage
1 | Extract_Genes_Modules_All(AMARETTOresults_all, gmt_filelist)
|
Arguments
AMARETTOresults_all |
list of AMARETTOresults objects for different AMARETTO runs |
gmt_filelist |
addresses to gmt files. |
Value
a dataframe for all AMARETTO files and given gmt file with the following structure : runname, ModuleNr, genename, gene-types, and weights of the driver genes.
Examples
1 | try(Extract_Genes_Modules_All(AMARETTOresults_all,gmt_filelist))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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