make_gencode_gene_id_map: Create GENCODE ID to gene name mapping
In bryancquach/omixjutsu: Utilities for omics analysis tasks
View source: R/gencode_utils.R
make_gencode_gene_id_map R Documentation
Create GENCODE ID to gene name mapping
Description
Creates a GENCODE ID to gene name mapping using a GTF file.
Usage
make_gencode_gene_id_map(gtf_file, output_file = NULL)
Arguments
gtf_file
A string denoting a GTF file from which to build the mapping.
output_file
Optional path and name of file to which to save the mapping table.
Value
A data frame with each row linking a GENCODE ID to a gene name and HGNC ID.
bryancquach/omixjutsu documentation built on Jan. 29, 2023, 3:47 p.m.
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View source: R/gencode_utils.R
| make_gencode_gene_id_map | R Documentation |
Create GENCODE ID to gene name mapping
Description
Creates a GENCODE ID to gene name mapping using a GTF file.
Usage
make_gencode_gene_id_map(gtf_file, output_file = NULL)
Arguments
gtf_file |
A string denoting a GTF file from which to build the mapping. |
output_file |
Optional path and name of file to which to save the mapping table. |
Value
A data frame with each row linking a GENCODE ID to a gene name and HGNC ID.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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