get_obs: Get observations metadata
In bschilder/scKirby: Automated ingestion and conversion of various single-cell data formats.
get_obs R Documentation
Get observations metadata
Description
Extract sample observations (i.e. cell) metadata from any single-cell object.
Usage
get_obs(obj, rownames_col = NULL, verbose = TRUE)
Arguments
obj
A single-cell object supported by scKirby.
See converters for a table of all supported conversions.
rownames_col
Name of the column to use as row names in the metadata
(i.e. unique cell IDs/barcodes).
verbose
Print messages.
Value
An observation (sample) metadata data.frame.
Examples
obj <- example_obj("scle")
obs <- get_obs(obj)
bschilder/scKirby documentation built on Oct. 2, 2024, 10:16 p.m.
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| get_obs | R Documentation |
Get observations metadata
Description
Extract sample observations (i.e. cell) metadata from any single-cell object.
Usage
get_obs(obj, rownames_col = NULL, verbose = TRUE)
Arguments
obj |
A single-cell object supported by scKirby. See converters for a table of all supported conversions. |
rownames_col |
Name of the column to use as row names in the metadata (i.e. unique cell IDs/barcodes). |
verbose |
Print messages. |
Value
An observation (sample) metadata data.frame.
Examples
obj <- example_obj("scle")
obs <- get_obs(obj)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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