API for caitiecollins/treeWAS
Run phylogenetic tree-based GWAS

Global functions
asr Man page Source code
assoc.test Man page Source code
beeswarmPlot Man page Source code
coalescent.sim Man page Source code
coalescent.tree.sim Man page Source code
fwd.coalescent.sim Man page Source code
fwd.phen.sim Man page Source code
fwd.snp.sim Man page Source code
get.ancestral.pars Man page Source code
get.assoc.scores Man page Source code
get.binary.snps Man page Source code
get.fitch.n.mts Man page Source code
get.locus Source code
get.original.loci Man page Source code
get.p.vals Source code
get.score3 Man page Source code
get.sig.snps Man page Source code
get.tip.order Man page Source code
get.unique.matrix Man page Source code
getDescendants Source code
getFixed Source code
ggplotbg Man page Source code
heatmap.DNAbin Man page Source code
keepFirstN Man page Source code
keepLastN Man page Source code
manhattan.plot Man page Source code
memfree Man page Source code
phen.sim Man page Source code
plot_phen Man page Source code
plot_prob_phen Man page Source code
plot_sig_snps Man page Source code
print.treeWAS Man page Source code
read.CFML Man page Source code
removeFirstN Man page Source code
removeLastN Man page Source code
s.even Source code
s.integer0 Source code
s.odd Source code
selectBiallelicSNP Man page Source code
set.args Man page Source code
simTest Man page Source code
simultaneous.test Man page Source code
snp.sim Man page Source code
snp.sim.Q Man page Source code
subsequent.test Man page Source code
substrLeft Source code
substrRight Source code
switch.phen Source code
table.matrix Man page Source code
terminal.test Man page Source code
tree.reconstruct Man page Source code
treeWAS Man page Source code
write.treeWAS Man page Source code
caitiecollins/treeWAS documentation built on July 12, 2018, 12:41 a.m.