Man pages for campbio/ExperimentSubset
Manages subsets of data with Bioconductor Experiment objects
| AssaySubset | AssaySubset constructor |
| AssaySubset-class | An S4 class to manage subset representation. |
| createSubset | Subset creation method for ExperimentSubset objects |
| ExperimentSubset | ExperimentSubset constructor |
| getSubsetAssay | Get subset assay from an 'ExperimentSubset' object. |
| reducedDimNames | reducedDimNames |
| reducedDimNames-set | reducedDimNames<- |
| reducedDims-set | reducedDims<- |
| reducedDims-set-ANY-method | reducedDims<- |
| setSubsetAssay | Method for storing new assays inside subsets in... |
| subsetAssayCount | Count method for subset assays in ExperimentSubset objects |
| subsetAssayNames | Name retrieval method for all subset assays in... |
| subsetColData | Accessor method for colData from subsets in ExperimentSubset... |
| subsetColLinks | Accessor method for colLinks from subsets in ExperimentSubset... |
| subsetColnames | subsetColnames |
| subsetCount | Subset count method for ExperimentSubset objects |
| subsetDim | Get dimensions of subsets in ExperimentSubset objects |
| subsetNames | Get names of only the subsets in ExperimentSubset objects |
| subsetParent | Subset parent hierarchy retrieval method for ExperimentSubset... |
| SubsetRangedSummarizedExperiment-class | An S4 class for 'RangedSummarizedExperiment' objects with... |
| subsetRowData | Accessor method for rowData from subsets in ExperimentSubset... |
| subsetRowLinks | Accessor method for rowLinks from subsets in ExperimentSubset... |
| subsetRownames | subsetRownames |
| SubsetSingleCellExperiment-class | An S4 class for 'SingleCellExperiment' objects with added... |
| subsetSpatialCoords | Accessor method for spatialCoords from subsets in... |
| subsetSpatialData | Accessor method for spatialData from subsets in... |
| SubsetSpatialExperiment-class | An S4 class for 'SpatialExperiment' objects with added... |
| SubsetSummarizedExperiment-class | An S4 class for 'SummarizedExperiment' objects with added... |
| subsetSummary | Method for displaying 'child-parent' link structure of... |
| SubsetTreeSummarizedExperiment-class | An S4 class for 'TreeSummarizedExperiment' objects with added... |
