annotate_replication_strand: Add replication strand annotation to SBS variants based on...
In campbio/musicatk: Mutational Signature Comprehensive Analysis Toolkit
View source: R/annotate_variants.R
annotate_replication_strand R Documentation
Add replication strand annotation to SBS variants based on bedgraph file
Description
Add replication strand annotation to SBS variants based on bedgraph file
Usage
annotate_replication_strand(musica, rep_range, build_table = TRUE)
Arguments
musica
A musica object.
rep_range
A GRanges object with replication timing as metadata
build_table
Automatically build a table from this annotation
Value
None
Examples
data(musica)
data(rep_range)
annotate_replication_strand(musica, rep_range)
campbio/musicatk documentation built on Oct. 22, 2023, 8:28 p.m.
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View source: R/annotate_variants.R
| annotate_replication_strand | R Documentation |
Add replication strand annotation to SBS variants based on bedgraph file
Description
Add replication strand annotation to SBS variants based on bedgraph file
Usage
annotate_replication_strand(musica, rep_range, build_table = TRUE)
Arguments
musica |
A |
rep_range |
A GRanges object with replication timing as metadata |
build_table |
Automatically build a table from this annotation |
Value
None
Examples
data(musica)
data(rep_range)
annotate_replication_strand(musica, rep_range)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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