create_sbs96_table: Uses a genome object to find context and generate standard...
In campbio/musicatk: Mutational Signature Comprehensive Analysis Toolkit
View source: R/standard_tables.R
create_sbs96_table R Documentation
Uses a genome object to find context and generate standard SBS96 tables
Description
Uses a genome object to find context and generate standard SBS96 tables
Usage
create_sbs96_table(musica, g, overwrite = FALSE)
Arguments
musica
A musica object.
g
A BSgenome object indicating which genome
reference the variants and their coordinates were derived from.
overwrite
Overwrite existing count table
Value
Returns the created SBS96 count table object
campbio/musicatk documentation built on Oct. 22, 2023, 8:28 p.m.
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View source: R/standard_tables.R
| create_sbs96_table | R Documentation |
Uses a genome object to find context and generate standard SBS96 tables
Description
Uses a genome object to find context and generate standard SBS96 tables
Usage
create_sbs96_table(musica, g, overwrite = FALSE)
Arguments
musica |
A |
g |
A BSgenome object indicating which genome reference the variants and their coordinates were derived from. |
overwrite |
Overwrite existing count table |
Value
Returns the created SBS96 count table object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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