Files in casaultb/azmpdata
A data package to share derived metrics from AZMP research documents
.DESCRIPTION.swp
.Rbuildignore
.github/.gitignore
.github/workflows/pkgdown.yaml
.gitignore
.travis.yml
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
R/area_indexer.R
R/azmpdata.R
R/azmpmap.R
R/data.R
R/df2sf.R
R/plot_availability.R
R/update_check.R
R/utils-pipe.R
R/variable_lookup.R
R/zzz.R
README.Rmd
README.md
_pkgdown.yml
azmpdata.Rproj
azmpdata_demo.ipynb
data/Derived_Annual_Broadscale.rda
data/Derived_Annual_Sections.rda
data/Derived_Annual_Stations.rda
data/Derived_Monthly_Broadscale.rda
data/Derived_Monthly_Stations.rda
data/Derived_Occupations_Sections.rda
data/Derived_Occupations_Stations.rda
data/Discrete_Occupations_Sections.rda
data/Discrete_Occupations_Stations.rda
data/Ice_Annual_Broadscale.rda
data/Phytoplankton_Annual_Stations.rda
data/Phytoplankton_Occupations_Stations.rda
data/RemoteSensing_Annual_Broadscale.rda
data/RemoteSensing_Weekly_Broadscale.rda
data/Zooplankton_Annual_Sections.rda
data/Zooplankton_Annual_Stations.rda
data/Zooplankton_Occupations_Broadscale.rda
data/Zooplankton_Occupations_Sections.rda
data/Zooplankton_Occupations_Stations.rda
data/Zooplankton_Seasonal_Broadscale.rda
data/Zooplankton_Seasonal_Sections.rda
docs/404.html
docs/LICENSE-text.html
docs/LICENSE.html
docs/articles/index.html
docs/articles/plotting_azmpdata.html
docs/articles/plotting_azmpdata_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/plotting_azmpdata_files/figure-html/unnamed-chunk-3-1.png
docs/articles/plotting_azmpdata_files/figure-html/unnamed-chunk-4-1.png
docs/articles/plotting_azmpdata_files/figure-html/unnamed-chunk-5-1.png
docs/articles/plotting_azmpdata_files/figure-html/unnamed-chunk-6-1.png
docs/articles/plotting_azmpdata_files/figure-html/unnamed-chunk-7-1.png
docs/articles/search_azmpdata.html
docs/articles/search_azmpdata_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/style_guide.html
docs/articles/style_guide_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/update_azmpdata.html
docs/articles/update_azmpdata_files/accessible-code-block-0.0.1/empty-anchor.js
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/Derived_Annual_Broadscale.html
docs/reference/Derived_Annual_Sections.html
docs/reference/Derived_Annual_Stations.html
docs/reference/Derived_Occupations_Sections.html
docs/reference/Derived_Occupations_Stations.html
docs/reference/Discrete_Annual_Broadscale.html
docs/reference/Discrete_Occupations_Sections.html
docs/reference/Discrete_Occupations_Stations.html
docs/reference/Phytoplankton_Annual_Stations.html
docs/reference/Phytoplankton_Occupations_Stations.html
docs/reference/RemoteSensing_Annual_Broadscale.html
docs/reference/RemoteSensing_Weekly_Broadscale.html
docs/reference/Zooplankton_Annual_Sections.html
docs/reference/Zooplankton_Annual_Stations.html
docs/reference/Zooplankton_Occupations_Broadscale.html
docs/reference/Zooplankton_Occupations_Sections.html
docs/reference/Zooplankton_Occupations_Stations.html
docs/reference/Zooplankton_Seasonal_Broadscale.html
docs/reference/Zooplankton_Seasonal_Sections.html
docs/reference/azmpdata.html
docs/reference/combine_all_data.html
docs/reference/index.html
docs/reference/lookup_variable.html
docs/reference/pipe.html
docs/reference/read.physical.html
docs/reference/update_check.html
docs/reference/variable_lookup.html
inst/extdata/Note_Derived_Monthly_Broadscale.txt
inst/extdata/csv/Derived_Annual_Broadscale.csv
inst/extdata/csv/Derived_Annual_Sections.csv
inst/extdata/csv/Derived_Annual_Stations.csv
inst/extdata/csv/Derived_Monthly_Broadscale.csv
inst/extdata/csv/Derived_Monthly_Stations.csv
inst/extdata/csv/Derived_Occupations_Sections.csv
inst/extdata/csv/Derived_Occupations_Stations.csv
inst/extdata/csv/Discrete_Annual_Broadscale.csv
inst/extdata/csv/Discrete_Occupations_Sections.csv
inst/extdata/csv/Discrete_Occupations_Stations.csv
inst/extdata/csv/Ice_Annual_Broadscale.csv
inst/extdata/csv/Phytoplankton_Annual_Stations.csv
inst/extdata/csv/Phytoplankton_Occupations_Stations.csv
inst/extdata/csv/Zooplankton_Annual_Sections.csv
inst/extdata/csv/Zooplankton_Annual_Stations.csv
inst/extdata/csv/Zooplankton_Occupations_Broadscale.csv
inst/extdata/csv/Zooplankton_Occupations_Sections.csv
inst/extdata/csv/Zooplankton_Occupations_Stations.csv
inst/extdata/csv/Zooplankton_Seasonal_Broadscale.csv
inst/extdata/csv/Zooplankton_Seasonal_Sections.csv
inst/extdata/datadate.txt
inst/extdata/derived/Derived_Annual_Broadscale.R
inst/extdata/derived/Derived_Annual_Sections.R
inst/extdata/derived/Derived_Annual_Stations.R
inst/extdata/derived/Derived_Monthly_Broadscale.R
inst/extdata/derived/Derived_Monthly_Stations.R
inst/extdata/derived/Derived_Occupations_Sections.R
inst/extdata/derived/Derived_Occupations_Stations.R
inst/extdata/discrete/Discrete_Occupations_Sections.R
inst/extdata/discrete/Discrete_Occupations_Stations.R
inst/extdata/ice/GSL_SS_Polygon.csv
inst/extdata/ice/Ice_Annual_Broadscale.R
inst/extdata/lookup/variable_look_up.csv
inst/extdata/phytoplankton/Phytoplankton_Annual_Stations.R
inst/extdata/phytoplankton/Phytoplankton_Occupations_Stations.R
inst/extdata/read_physical.R
inst/extdata/remote_sensing/RemoteSensing_Annual_Broadscale.R
inst/extdata/remote_sensing/RemoteSensing_Weekly_Broadscale.R
inst/extdata/source_all.R
inst/extdata/zooplankton/Zooplankton_Annual_Sections.R
inst/extdata/zooplankton/Zooplankton_Annual_Stations.R
inst/extdata/zooplankton/Zooplankton_Occupations_Broadscale.R
inst/extdata/zooplankton/Zooplankton_Occupations_Sections.R
inst/extdata/zooplankton/Zooplankton_Occupations_Stations.R
inst/extdata/zooplankton/Zooplankton_Seasonal_Broadscale.R
inst/extdata/zooplankton/Zooplankton_Seasonal_Sections.R
man/Derived_Annual_Broadscale.Rd
man/Derived_Annual_Sections.Rd
man/Derived_Annual_Stations.Rd
man/Derived_Monthly_Broadscale.Rd
man/Derived_Monthly_Stations.Rd
man/Derived_Occupations_Sections.Rd
man/Derived_Occupations_Stations.Rd
man/Discrete_Occupations_Sections.Rd
man/Discrete_Occupations_Stations.Rd
man/Ice_Annual_Broadscale.Rd
man/Phytoplankton_Annual_Stations.Rd
man/Phytoplankton_Occupations_Stations.Rd
man/RemoteSensing_Annual_Broadscale.Rd
man/RemoteSensing_Weekly_Broadscale.Rd
man/Zooplankton_Annual_Sections.Rd
man/Zooplankton_Annual_Stations.Rd
man/Zooplankton_Occupations_Broadscale.Rd
man/Zooplankton_Occupations_Sections.Rd
man/Zooplankton_Occupations_Stations.Rd
man/Zooplankton_Seasonal_Broadscale.Rd
man/Zooplankton_Seasonal_Sections.Rd
man/area_indexer.Rd
man/azmpdata.Rd
man/azmpmap.Rd
man/df2sf.Rd
man/pipe.Rd
man/plot_availability.Rd
man/update_check.Rd
man/variable_lookup.Rd
meetingNotes/01052021_meetingnotes.Rmd
meetingNotes/01052021_meetingnotes.html
meetingNotes/01262021_meetingnotes.Rmd
meetingNotes/01262021_meetingnotes.html
meetingNotes/04092020_meetingnotes.Rmd
meetingNotes/04092020_meetingnotes.html
meetingNotes/07042020_meetingnotes.nb.html
meetingNotes/07042020_meetingnotes.rmd
meetingNotes/07072020_meetingnotes.Rmd
meetingNotes/07072020_meetingnotes.html
meetingNotes/08052020_meetingnotes.nb.html
meetingNotes/08052020_meetingnotes.rmd
meetingNotes/08202020_meetingnotes.Rmd
meetingNotes/08202020_meetingnotes.html
meetingNotes/10012020_meetingNotes.Rmd
meetingNotes/10012020_meetingNotes.html
meetingNotes/10062020_meetingnotes.Rmd
meetingNotes/10062020_meetingnotes.html
meetingNotes/11122020_meetingnotes.Rmd
meetingNotes/11122020_meetingnotes.html
meetingNotes/12012020_meetingnotes.Rmd
meetingNotes/12012020_meetingnotes.html
meetingNotes/18092020_meetingNotes.Rmd
meetingNotes/18092020_meetingNotes.nb.html
meetingNotes/22072020_meetingnotes.Rmd
meetingNotes/22072020_meetingnotes.html
meetingNotes/22102020_meetingnotes.Rmd
meetingNotes/22102020_meetingnotes.html
meetingNotes/24042020_meetingnotes.nb.html
meetingNotes/24042020_meetingnotes.rmd
meetingNotes/24062020_meetingnotes.Rmd
meetingNotes/24062020_meetingnotes.html
meetingNotes/27052020_meetingnotes.Rmd
meetingNotes/27052020_meetingnotes.nb.html
meetingNotes/supp_files/annualReportingProducts.xlsx
meetingNotes/supp_files/azmpDataFileColumns.xlsx
meetingNotes/supp_files/azmpdata_chart.PNG
meetingNotes/supp_files/azmpdata_comments.PNG
meetingNotes/supp_files/azmpmetrics.xlsx
tests/testthat.R
tests/testthat/test-search_azmpdata.R
tmp/BC/R/AZMP_Sections_csv2sf.R
tmp/BC/R/Anomaly_Example.R
tmp/BC/R/Derived_Occupations_Stations_to_update.R
tmp/BC/R/Get_ODF_metadata.R
tmp/BC/R/Ice_Duration.png
tmp/BC/R/Ice_First_Day.png
tmp/BC/R/Ice_Last_Day.png
tmp/BC/R/Plot_Polygons_Example.R
tmp/BC/R/SS_csv2sf.R
tmp/BC/R/Standard_Depth_Lookup.R
tmp/BC/R/compare_ice timing_metrics.R
tmp/BC/R/compare_ice timing_metrics.Rmd
tmp/BC/R/compare_ice-timing_metrics.html
tmp/BC/R/plot_annual_means.R
tmp/BC/R/plot_azmpdata.R
tmp/BC/R/plot_timeseries.R
tmp/BC/R/polygons_csv2sf.R
tmp/BC/R/search_azmpdata.R
tmp/BC/R/test_match_missions.R
tmp/BC/R/test_plotting.R
tmp/BC/data/HL2_odf_list.csv
tmp/BC/data/HL2_odf_metadata.RData
tmp/BC/data/PL_Zoo_Metadata_HL2_20210316.RData
tmp/BC/data/azmp_ctd_statistics.xlsx
tmp/BC/data/biochem_mission.csv
tmp/BC/data/listOfStation2Filenames.csv
tmp/BC/data/listOfStation2Filenames_extra.csv
tmp/BC/data/mission.csv
tmp/BC/data/occupations/DIS_Occupations_HL2.csv
tmp/BC/data/occupations/PL_Occupations_HL2.csv
tmp/BC/data/odf_mission.csv
tmp/BC/data/polygons/polygons.RData
tmp/BC/data/polygons/polygons_attributes.csv
tmp/BC/data/polygons/polygons_attributes_2.csv
tmp/BC/data/polygons/polygons_geometry.csv
tmp/BC/data/polygons/polygons_geometry_2.csv
tmp/CL/01_mapPlotOfAreas.R
tmp/CL/02_userTest.R
tmp/CL/03_get_mission_names.R
tmp/CL/04_Discrete_Occupations_Sections.R
tmp/CL/05_issue26Reprex.R
vignettes/.gitignore
vignettes/README_files/figure-gfm/plot_annualmeans-1.png
vignettes/README_files/figure-gfm/plot_timeseries-1.png
vignettes/azmpmap.png
vignettes/flowchart.png
vignettes/plotting_azmpdata.Rmd
vignettes/search_azmpdata.Rmd
vignettes/style_guide.Rmd
vignettes/update_azmpdata.Rmd
