Theta_to_pathways: Compute the pathway probabilities given a Mutual Hazard...

In cbg-ethz/TreeMHN: Joint inference of repeated evolutionary trajectories and patterns of clonal exclusivity from single-cell mutation trees

Compute the pathway probabilities given a Mutual Hazard Network

Description

This function computes the pathway probabilities given a Mutual Hazard Network.

Usage

Theta_to_pathways(Theta, n_order = 4, prob_only = TRUE)

Arguments

Theta	An MHN represented by a square matrix.
n_order	Length of the pathways (Default: 4).
prob_only	A Boolean value that determines whether to output only the pathway probabilities or the data frame containing also the pathways (Default: TRUE).

Value

Pathway probabilities

Author(s)

Xiang Ge Luo

cbg-ethz/TreeMHN documentation built on Jan. 29, 2024, 1:29 p.m.