plot_tree_df: Plot a tree in data frame format

In cbg-ethz/TreeMHN: Joint inference of repeated evolutionary trajectories and patterns of clonal exclusivity from single-cell mutation trees

Plot a tree in data frame format

Description

This function plots a tree in data frame format.

Usage

plot_tree_df(
  tree_df,
  mutations,
  tree_label = NULL,
  main_node_color = "paleturquoise3",
  next_node_color = "thistle"
)

Arguments

tree_df	A tree in data frame format.
mutations	A list of mutation names corresponding to the mutation IDs.
tree_label	The title of the tree (Default: NULL).
main_node_color	The color of the nodes in the main tree structure (Default: pale turquoise).
next_node_color	The color of the nodes in the augmented tree structure (Default: thistle).

Author(s)

Xiang Ge Luo

cbg-ethz/TreeMHN documentation built on Jan. 29, 2024, 1:29 p.m.