validate.cnv: Initialization of CNV data
In ccbiolab/svpluscnv: svpluscnv: analysis and visualization of complex structural variation data
Description
Usage
Arguments
Value
Examples
View source: R/validate.input.data.r
Description
This function validates and reformats the CNV segmentation data type containing copy number log-ratios. It is used internaly by 'svpluscnv' functions that require this type of data.
Usage
1
validate.cnv(cnv.df)
Arguments
cnv.df
(data.frame) segmentation data with at least 6 columns: sample, chromosome, start, end, probes, segment_mean
Value
an instance of the class 'svcnvio' containing segmentation data derived from CNV data type; A unique id (uid) column is also added
Examples
1
ccbiolab/svpluscnv documentation built on Sept. 9, 2020, 4:52 a.m.
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Description Usage Arguments Value Examples
View source: R/validate.input.data.r
Description
This function validates and reformats the CNV segmentation data type containing copy number log-ratios. It is used internaly by 'svpluscnv' functions that require this type of data.
Usage
1 | validate.cnv(cnv.df)
|
Arguments
cnv.df |
(data.frame) segmentation data with at least 6 columns: sample, chromosome, start, end, probes, segment_mean |
Value
an instance of the class 'svcnvio' containing segmentation data derived from CNV data type; A unique id (uid) column is also added
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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