Files in charles-bernard/mage
Mine Associated Gene Expressions (from single-cell Rna Seq data)
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/classify.R
R/cluster_exploration.R
R/clustering.R
R/compute_scores_and_pval.R
R/data.R
R/mage.R
R/operations_on_scores.R
R/plots.R
R/sampling.R
R/sysdata.rda
README.md
data-raw/fetch_MIC_pval_tables.R
data/pbmc_small_raw_data.rda
inst/CITATION
mage.Rproj
man/adjust_pval.Rd
man/assign_pval.Rd
man/clara_clustering.Rd
man/compute_density.Rd
man/compute_scores.Rd
man/explore_clusters.Rd
man/filter_scores.Rd
man/get_classified_asso.Rd
man/get_optimal_k.Rd
man/get_relevant_k.Rd
man/mage.Rd
man/pbmc_small_raw_data.Rd
man/phenograph_clustering.Rd
man/plot_scores_relationships.Rd
man/sample.Rd
man/show_associations.Rd
man/show_heatmap.Rd
man/show_reduced_space.Rd
man/standardize_scores.Rd
src/.gitignore
src/compute_density.cc
src/util.h
vignettes/mage-overview.Rmd
vignettes/mage-overview.md
vignettes/mage-overview_files/figure-html/three_scatterplots-1.png
vignettes/mage-overview_files/figure-html/three_scatterplots-2.png
vignettes/mage-overview_files/figure-html/three_scatterplots-3.png
vignettes/mage-overview_files/figure-html/unnamed-chunk-1-1.png
vignettes/mage-overview_files/figure-html/unnamed-chunk-1-2.png
