mage: mage: Mine Associated Gene Expressions (from single-cell Rna...

In charles-bernard/mage: Mine Associated Gene Expressions (from single-cell Rna Seq data)

Description

The purpose of mage is to capture, and more essentially to classify, any association between 2 gene expressions in a Single Cell Rna Seq Dataset.

Details

acronym

Mine Associated Gene Expressions

relies on

The Mine statistics to measure the strength of association between 2 gene expressions and to characterize the 'shape' of the association with different scores (non-monotonicity, non-linearity, complexity ...)

main assumption

Two similar scatterplots (btw 2 genes) must have similar "characterization" scores

main principle

an association/gene_pair can be represented as a point in a n-dimensional space where n is the number of scores

charles-bernard/mage documentation built on May 14, 2019, 2 a.m.