get_relevant_k: get_relevant_k
In charles-bernard/mage: Mine Associated Gene Expressions (from single-cell Rna Seq data)
Description
Usage
Arguments
Value
Description
calls NbClust package to return a list of relevant k
according to different methodologies
Usage
1
get_relevant_k(scores_tab, ix = NULL, kmax = 12)
Arguments
scores_tab
data.table, the table of scores
ix
boolean vector of indexes to which scores_tab must be reduced (sampling output)
kmax
maximun number of clusters allowed
Value
a list of 2 elements
- NbClust_output
A vector of integer storing the best k returned by each method
- majority_rule_k
k most often returned
charles-bernard/mage documentation built on May 14, 2019, 2 a.m.
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Description Usage Arguments Value
Description
calls NbClust package to return a list of relevant k according to different methodologies
Usage
1 | get_relevant_k(scores_tab, ix = NULL, kmax = 12)
|
Arguments
scores_tab |
data.table, the table of scores |
ix |
boolean vector of indexes to which |
kmax |
maximun number of clusters allowed |
Value
a list of 2 elements
- NbClust_output
A vector of integer storing the best k returned by each method
- majority_rule_k
k most often returned
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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