Files in chedonat/DigitalPicoTools
DIGITAL ANALYSIS OF PICOGRAM QUANTITIES OF DNA
DESCRIPTION
DigitalPicoTools.Rproj
DigitalPicoTools/.Rbuildignore
DigitalPicoTools/.gitignore
DigitalPicoTools/DESCRIPTION
DigitalPicoTools/DigitalPicoTools.Rproj
DigitalPicoTools/NAMESPACE
NAMESPACE
R/.DS_Store
R/DigitalPicoTools.R
R/data.R
R/phasing_functions.R
R/ploting_methods.R
R/vcf_tools.R
README.md
data/.DS_Store
data/FiveWellsLFRset.rda
inst/.DS_Store
inst/extdata/.DS_Store
inst/extdata/1115_LFR_chr22.vcf.gz
inst/extdata/A005.bam
inst/extdata/A005.bam.bai
inst/extdata/A008.bam.bai
inst/extdata/A016.bam
inst/extdata/A016.bam.bai
inst/extdata/Allwells_chr22_LFR.tsv.gz
inst/extdata/D1000_10k_allfragments.tsv.gz
inst/extdata/L006.bam
inst/extdata/L006.bam.bai
inst/extdata/L024.bam
inst/extdata/L024.bam.bai
inst/extdata/LFR_11152_Tissue_chr13.vcf.gz
inst/extdata/LFR_11152_Tissue_chr22.vcf.gz
inst/extdata/LFR_11152_Tissue_chr22_1000variants.vcf.gz
inst/extdata/P009.bam
inst/extdata/P009.bam.bai
inst/extdata/wells_id_tissue.txt
man/.DS_Store
man/ComputePhasingCode.Rd
man/DigitalPicoTools.Rd
man/LFRdataframe-class.Rd
man/LFRset.Rd
man/SampleCoverage.Rd
man/VariantAlleleInfo.Rd
man/WellSample.Rd
man/getBreadthGenomeCoverage-methods.Rd
man/getBreadthGenomeCoverage.Rd
man/getLFRStats-methods.Rd
man/getLFRStats.Rd
man/getLFRStatsPerWell-methods.Rd
man/getLFRStatsPerWell.Rd
man/getLFRset.Rd
man/getMutationsOfLFR.Rd
man/getN50-methods.Rd
man/getN50.Rd
man/getVariantAlleleInfo.Rd
man/getVariantCoverageTable.Rd
man/getWellLFRset-methods.Rd
man/getWells-methods.Rd
man/hist.LFRset.Rd
man/initsWellSamples.Rd
man/plot.LFRset.Rd
man/plot.VariantAlleleInfo.Rd
man/plotLFRDistribution-methods.Rd
man/plotLFRDistribution.Rd
man/summary.LFRset.Rd
vignettes/DigitalPicoTools.Rmd
