Add_AssignVariant-redeemR-method: a function to assign variants to edges based on maximum...
In chenweng1991/scMitoTracing: R package for Regulatory multi-omics with Deep Mitochondrial mutation profiling
Add_AssignVariant,redeemR-method R Documentation
a function to assign variants to edges based on maximum likihood
Description
a function to assign variants to edges based on maximum likihood
Usage
## S4 method for signature 'redeemR'
Add_AssignVariant(redeemR = DN1_HSC_redeemR.VerySensitive, n.cores = 4)
Arguments
redeemR
Need to have redeemR@Ctx.Mtx.depth (By Add_DepthMatrix), redeemR@Cts.Mtx redeemR@Cts.Mtx.bi, redeemR@TREE
Value
redeemR with @AssignedVarian list of two p is a probability matrix of variants vs edges (Rowsum is 1) and Variant.assign.report, a dataframe (Variant|Edge.Assign|prob)
chenweng1991/scMitoTracing documentation built on July 2, 2024, 8:41 p.m.
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| Add_AssignVariant,redeemR-method | R Documentation |
a function to assign variants to edges based on maximum likihood
Description
a function to assign variants to edges based on maximum likihood
Usage
## S4 method for signature 'redeemR'
Add_AssignVariant(redeemR = DN1_HSC_redeemR.VerySensitive, n.cores = 4)
Arguments
redeemR |
Need to have redeemR@Ctx.Mtx.depth (By Add_DepthMatrix), redeemR@Cts.Mtx redeemR@Cts.Mtx.bi, redeemR@TREE |
Value
redeemR with @AssignedVarian list of two p is a probability matrix of variants vs edges (Rowsum is 1) and Variant.assign.report, a dataframe (Variant|Edge.Assign|prob)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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