geraMapa: Plot the alert map for any state.

In claudia-codeco/AlertTools: utility functions for the Alerta Dengue System

Description

Function to plot a map of the alert.

Usage

geraMapa(
  alerta,
  subset,
  se,
  cores = c("green", "yellow", "orange", "red"),
  legpos = "bottomright",
  titulo = "",
  filename,
  dir = "",
  shapefile,
  varid,
  varname,
  caption = TRUE,
  resol = 200
)

Arguments

alerta	object created by update.alerta.
subset	nomes das cidades que serão mostradas no mapa.
se	epidemiological week (format = 201610).
cores	colors corresponding to the levels 1, 2, 3, 4.
legpos	legend position. Default is bottomright. Check the other options in the function legend.
titulo	title of the map
filename	if present, the map is saved.
dir	directory where map will be saved
shapefile	shapefile containing polygons for the municipalities
varid	shapefile variable indicating the geocode of the municipalities
varname	name of the variable to be plotted
caption	Default is TRUE
resol	dpi png resolution, default is 200

Value

a map

Examples

# Parameters for the model
cidades <- getCidades(regional = "Norte",uf = "Rio de Janeiro",datasource = con)
res <- pipe_infodengue(cities = cidades$municipio_geocodigo, cid10 = "A90", 
finalday= "2018-08-12",nowcasting="none")
geraMapa(alerta=res, subset = c(3300936, 3302403), se=201804, 
shapefile="shape/33MUE250GC_SIR.shp", varid="CD_GEOCMU", titulo="RJ-Norte")

claudia-codeco/AlertTools documentation built on Aug. 12, 2021, 9:58 a.m.