SpidermiRquery_spec_networks: Searching by network categories

In claudiacava/SpidermiR: SpidermiR: An R/Bioconductor package for integrative network analysis with miRNA data

Searching by network categories

Description

The user can visualize the database or reference where the information came from

Usage

SpidermiRquery_spec_networks(organismID, network)

Arguments

organismID	describes index of a specific specie obtained by SpidermiRquery_species output
network	The network type the user is interested in. Example: COexp Co-expression PHint Physical_interactions COloc Co-localization GENint Genetic_interactions PATH Pathway SHpd Shared_protein_domains pred Predicted

Value

a list of the database or reference where the information came from.

Examples

org<-SpidermiRquery_species(species)
net_shar_prot<-SpidermiRquery_spec_networks(organismID = org[9,],
                                        network = "SHpd")

claudiacava/SpidermiR documentation built on Oct. 11, 2022, 4:52 p.m.