Description Usage Arguments Details Author(s) Examples
View source: R/generate_test_granges.R
Generate a test GRanges object
1 | gintools:::generate_test_granges(n_sites = 5, n_reads_p_site = 20, site_range = 1:1000, read_width_range = 30:100)
|
n_sites |
number of sites to generate |
n_reads_p_site |
number of reads per site |
site_range |
numeric vector to sample from for postion of the integration sites |
read_width_range |
range of widths to sample from for each read |
stdev |
numeric, standard deviation of the integration site distribution around the selected positions |
positions |
a numeric vector of preselected positions. |
Varies the integration start position in with a normal distribution around the random integration site and then assignes a random uniform distribution of widths for the sites.
Christopher Nobles, Ph.D.
1 | gintools:::generate_test_granges()
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.