Files in cnobles/gintools
Genomic DNA Integration Analysis Tools
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/break_connecting_source_paths.R
R/cluster_kv.R
R/cluster_multihits.R
R/condense_intsites.R
R/connect_adjacent_clusters.R
R/connect_satalite_vertices.R
R/db_to_granges.R
R/depreciated/normalize_intsite_positions.R
R/depreciated/quick_clus_format.R
R/depreciated/resolve_source_deficiency.R
R/depreciated/scan_clusters.R
R/determine_abundance.R
R/generate_posid.R
R/generate_test_granges.R
R/graph_clusters.R
R/normalize_multihit_clusters.R
R/nucleotide_scoring_matrices.R
R/other_standardization_methods.R
R/pop_calcs.R
R/refine_breakpoints.R
R/resolve_cluster_sources.R
R/scan_format.R
R/serial_cluster.R
R/sinks.R
R/sources.R
R/standardize_sites.R
R/track_clones.R
R/unique_granges.R
R/vcollapse.R
R/vinteresct.R
R/vzip.R
R/write_demultiplexed_sequences.R
README.md
dev_scratch.R
man/asanmat.Rd
man/banmat.Rd
man/break_connecting_source_paths.Rd
man/cluster_kv.Rd
man/cluster_multihits.Rd
man/condense_intsites.Rd
man/connect_adjacent_clusters.Rd
man/connect_satalite_vertices.Rd
man/db_to_granges.Rd
man/determine_abundance.Rd
man/dot-clusterSites.Rd
man/dot-standardizeSites.Rd
man/generate_posid.Rd
man/generate_test_granges.Rd
man/graph_clusters.Rd
man/normalize_multihit_clusters.Rd
man/pop_calcs.Rd
man/refine_breakpoints.Rd
man/resolve_cluster_sources.Rd
man/scan_format.Rd
man/serial_cluster.Rd
man/sinks.Rd
man/sources.Rd
man/ssanmat.Rd
man/standardize_sites.Rd
man/track_clones.Rd
man/unique_granges.Rd
man/vcollapse.Rd
man/vintersect.Rd
man/vzip.Rd
man/write_demultiplexed_sequences.Rd
tests/testthat.R
tests/testthat/test_cluster_kv.R
tests/testthat/test_condense_intsites.R
tests/testthat/test_db_to_granges.R
tests/testthat/test_determine_abundance.R
tests/testthat/test_generate_posid.R
tests/testthat/test_refine_breakpoints.R
tests/testthat/test_standardize_sites.R
tests/testthat/test_unique_granges.R
