View source: R/nucleotide_scoring_matrices.R

Meant for comparing ambiguous sequences against other sequences possibly containing ambiguous nucleotides. The scores are scaled between 0 and 1 for ambiguous matches based on overlaping proportions and the matrix is symmetric. Constructed originally from NUC4.4. Function outputs a single square matrix.

1 | ```
ssanmat()
``` |

Christopher Nobles, Ph.D.

Embedding an R snippet on your website

Add the following code to your website.

For more information on customizing the embed code, read Embedding Snippets.